More examples using igraph and Cytoscape. Data integration is done in R and the entire visualization process is automated.

Basic workflow using R, igraph, and Cytoscape. This is a toy example to visualize shortest path in Cytoscape

Overview of cyREST basic features.

Part 3 of introduction: Understanding Visual Style in Cytoscape.

more details about how to use Cytoscape with igraph.

Basic workflow to lean how to use Cytoscape REST API from R.