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R Lab 2
Validity and Reliability
Analisis Multivariat Assigment 1
Anggota : 1. Raden Roro Azzahra Tzitziliani Foulin (23031554003) 2. Fardaniyah Hazhiratul Dzauq (23031554045) 3. Novanna Zahrah Zahrani (23031554141)
Risk of Social Isolation by County (Texas) (5-Year Composite Score) (2023-2019)
############ This map is a "modern" iteration of the Senior Health Report from "America's Health Rankings" by the United Health Foundation using 2023-2018 U.S Census data to build its values. As of 02/17/2025, the Senior Health Report using this data has not been released. Some methodology data can be found here: https://www.americashealthrankings.org/about/methodology/rankings The maps themselves can be found here: https://www.americashealthrankings.org/explore/measures/isolationrisk_sr_b/CA#measure-trend-summary #################################### original code below: library(easypackages) libraries(c("readxl", "gtsummary", "ggmap", "ggiraph", "ggforce", "ggcorrplot", "ggthemes", "ggsignif", "ggsflabel", "ggrepel", "ggpubr", "ggsci", "glue", "gt", "janitor", "maptools", "mapview", "magrittr", "plyr", "prettyunits", "progress", "progressr", "psych", "rgeos", "rio", "rms", "Hmisc", "robustbase", "rspat", "s2", "sfheaders", "sfweight", "snakecase", "smoothr", "sp", "spatial", "spatialEco", "spatstat", "spatstat.linnet", "spatstat.model", "rpart", "spatstat.explore", "nlme", "spatstat.random", "spatstat.geom", "spatstat.data", "spdep", "sf", "spData", "abind", "summarytools", "terra", "tidycensus", "tidylog", "tidyselect", "lubridate", "forcats", "stringr", "dplyr", "purrr", "readr", "tidyr", "tibble", "ggplot2", "tidyverse", "tigris", "tmap", "vctrs", "viridis", "viridisLite", "vroom", "waldo", "wk", "stats", "graphics", "grDevices", "utils", "datasets", "methods", "base", "haven", "foreign", "survey", "srvyr", "sitrep", "questionr", "srvyr", "stringr", "readxl", "gtsummary")) ##note: switch to 2022 if you want to replicate the SHR map here: https://assets.americashealthrankings.org/app/uploads/rosi2024_all.pdf # acs_2022_vars <- load_variables(2022, "acs5", cache = TRUE) # ##Poverty # get_acs("county", table = "B17001", year= 2022, state="TX", survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> poverty_USA # ##Marital Status (i.e. Never Married, Separated, Widowed, Divorced) # get_acs("county", table = "B12002", state = "TX", year= 2022, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> maritalstatus_USA # ##Living Alone 65+ (why they didn't check for multicollinearity between this and marital status or whatever I don't know but w/e) # get_acs("county", table = "B11007", state="TX", year= 2022, survey = "acs5", summary_var = "B11007_002", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> living_alone_65_USA # ##Disability # get_acs("county", table = "B18101", state="TX", year= 2022, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% .[,-8] %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> disability_USA # ##Independent Living # get_acs("county", table = "B18107", state="TX", year= 2022, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> USA_independentliving #########uncomment the singles above to replicate acs_2023_vars <- load_variables(2023, "acs5", cache = TRUE) #Poverty get_acs("county", table = "B17001", year= 2023, state="TX", survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> poverty_USA #Marital Status (i.e. Never Married, Separated, Widowed, Divorced) get_acs("county", table = "B12002", state = "TX", year= 2023, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> maritalstatus_USA #Living Alone 65+ (why they didn't check for multicollinearity between this and marital status or whatever I don't know but w/e) get_acs("county", table = "B11007", state="TX", year= 2023, survey = "acs5", summary_var = "B11007_002", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> living_alone_65_USA #Disability get_acs("county", table = "B18101", state="TX", year= 2023, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% .[,-8] %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> disability_USA #Independent Living get_acs("county", table = "B18107", state="TX", year= 2023, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> USA_independentliving ## current state z-composite draft (2/15/24, 1:22pm) #USA Disability scores (1) disability_USA %>% #single out only the elderly (65+) filter(label4 == "65 to 74 years:" | label4 == "75 years and over:") %>% #remove all the "grand total" rows filter(!is.na(label5)) %>% #calculate the "grand total" that we need to use by summing the disabled + not disabled across men and women transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% #calculate the percentage of those that are disable and sum them up, and then divide by total elders to get the total proportion of disabled filter(label5 == "With a disability") %>% mutate(prop = 100 * (estimate/total_elders)) %>% ##this feels REALLY [adjective], but it's what they did, I swear to God transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Disabled") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% unique(.) %>% arrange(desc(-total_prop)) %>% st_as_sf(.) ->disability_USA_Z #USA Poverty scores (2) poverty_USA %>% filter(label5 == "65 to 74 years" | label5 == "75 years and over") %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(grepl("below", label3)) %>% mutate(prop = 100 * (estimate/total_elders)) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% arrange(desc(-total_prop)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Poverty") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) ->poverty_USA_Z #USA Living Alone scores (3) living_alone_65_USA %>% filter(variable == "B11007_003") %>% mutate(prop = 100 * (estimate/summary_est)) %>% mutate(age = "65+") %>% unique(.) %>% arrange(desc(-prop)) %>% mutate(total_prop = prop, rank = rank(prop, ties.method = "min"), measure = "Living Alone") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> living_alone_65_USA_Z #USA Not Married scores (4) maritalstatus_USA %>% filter(label5 == "65 to 74 years" | label5 == "75 to 84 years" | label5 == "85 years and over" | label6 == "65 to 74 years" | label6 == "75 to 84 years" | label6 == "85 years and over" | label7 == "65 to 74 years" | label7 == "75 to 84 years" | label7 == "85 years and over") %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(label4 == "Never married:") %>% transform(not_married_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(prop = 100 * (not_married_sum/total_elders)) %>% dplyr::select(NAME, not_married_sum, prop, geometry) %>% unique(.) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% unique(.) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Not Married") %>% arrange(desc(-total_prop)) %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> USA_not_married_Z #USA Widowed, Separated, or Divorced scores (5) maritalstatus_USA %>% filter(label5 == "65 to 74 years" | label5 == "75 to 84 years" | label5 == "85 years and over" | label6 == "65 to 74 years" | label6 == "75 to 84 years" | label6 == "85 years and over" | label7 == "65 to 74 years" | label7 == "75 to 84 years" | label7 == "85 years and over") %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(label4 == "Widowed:" | label4 == "Divorced:" | label6 == "Separated:") %>% transform(widow_separate_divorced_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% transform(div_sep_wid_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(prop = 100 * (div_sep_wid_sum/total_elders)) %>% dplyr::select(NAME, div_sep_wid_sum, prop, geometry) %>% unique(.) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% unique(.) %>% arrange(desc(-div_sep_wid_sum)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Widowed, Divorced, or Separated") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> USA_widow_separate_divorced_Z #USA Independent Living scores (6) USA_independentliving %>% filter(label4 == "65 to 74 years:" | label4 == "75 years and over:") %>% filter(!is.na(label5)) %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(label5 == "With an independent living difficulty") %>% transform(diff_indep_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% transform(diff_indep_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(prop = 100 * (diff_indep_sum/total_elders)) %>% dplyr::select(NAME, diff_indep_sum, prop, geometry) %>% unique(.) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% unique(.) %>% arrange(desc(-diff_indep_sum)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Difficulty Living Independently") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> USA_independentliving_Z rbind(poverty_USA_Z, living_alone_65_USA_Z, USA_widow_separate_divorced_Z, USA_not_married_Z, USA_widow_separate_divorced_Z, disability_USA_Z, USA_independentliving_Z) %>% unique(.) %>% group_by(measure) %>% mutate(my_z_score = (total_prop - mean(total_prop))/sd(total_prop)) %>% ungroup(.) %>% transform(my_state_mean_z = ave(.$my_z_score, .$NAME, FUN=mean)) %>% mutate(my_possible_composite = my_state_mean_z %>% scales::rescale(., to=c(1,100)) %>% round(.), my_possible_rank = dense_rank(my_possible_composite)) %>% unique(.) %>% dplyr::select(NAME, my_possible_composite, my_possible_rank, my_state_mean_z) %>% unique(.) -> z_composites_county z_composites_county %>% dplyr::rename(., County = 1, `Composite Score` = 2, `County Rank` = 3 ) %>% tm_shape(.) + tm_polygons(col = "Composite Score", palette = blues9, breaks = c(1,34, 39, 45, 51, 100), popup.vars = c("County", "Composite Score", "County Rank"), as.count=TRUE) + tm_layout(title = "Risk of Social Isolation by County (5-Year Composite Score) (2023-2019)") + tm_credits("Aggregate Index using U.S. Census American Community Survey Values. Thanks to United Heath Foundation for original concept.")
Risk of Social Isolation by County (Texas) (5-Year Composite Score) (2022-2018)
library(easypackages) libraries(c("readxl", "gtsummary", "ggmap", "ggiraph", "ggforce", "ggcorrplot", "ggthemes", "ggsignif", "ggsflabel", "ggrepel", "ggpubr", "ggsci", "glue", "gt", "janitor", "maptools", "mapview", "magrittr", "plyr", "prettyunits", "progress", "progressr", "psych", "rgeos", "rio", "rms", "Hmisc", "robustbase", "rspat", "s2", "sfheaders", "sfweight", "snakecase", "smoothr", "sp", "spatial", "spatialEco", "spatstat", "spatstat.linnet", "spatstat.model", "rpart", "spatstat.explore", "nlme", "spatstat.random", "spatstat.geom", "spatstat.data", "spdep", "sf", "spData", "abind", "summarytools", "terra", "tidycensus", "tidylog", "tidyselect", "lubridate", "forcats", "stringr", "dplyr", "purrr", "readr", "tidyr", "tibble", "ggplot2", "tidyverse", "tigris", "tmap", "vctrs", "viridis", "viridisLite", "vroom", "waldo", "wk", "stats", "graphics", "grDevices", "utils", "datasets", "methods", "base", "haven", "foreign", "survey", "srvyr", "sitrep", "questionr", "srvyr", "stringr", "readxl", "gtsummary")) ##note: switch to 2022 if you want to replicate the SHR map here: https://assets.americashealthrankings.org/app/uploads/rosi2024_all.pdf acs_2022_vars <- load_variables(2022, "acs5", cache = TRUE) ##Poverty get_acs("county", table = "B17001", year= 2022, state="TX", survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> poverty_USA ##Marital Status (i.e. Never Married, Separated, Widowed, Divorced) get_acs("county", table = "B12002", state = "TX", year= 2022, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> maritalstatus_USA ##Living Alone 65+ (why they didn't check for multicollinearity between this and marital status or whatever I don't know but w/e) get_acs("county", table = "B11007", state="TX", year= 2022, survey = "acs5", summary_var = "B11007_002", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> living_alone_65_USA ##Disability get_acs("county", table = "B18101", state="TX", year= 2022, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% .[,-8] %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> disability_USA ##Independent Living get_acs("county", table = "B18107", state="TX", year= 2022, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2022_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> USA_independentliving ##########uncomment the singles above to replicate # # acs_2023_vars <- load_variables(2023, "acs5", cache = TRUE) # #Poverty # get_acs("county", table = "B17001", year= 2023, state="TX", survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> poverty_USA # #Marital Status (i.e. Never Married, Separated, Widowed, Divorced) # get_acs("county", table = "B12002", state = "TX", year= 2023, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> maritalstatus_USA # #Living Alone 65+ (why they didn't check for multicollinearity between this and marital status or whatever I don't know but w/e) # get_acs("county", table = "B11007", state="TX", year= 2023, survey = "acs5", summary_var = "B11007_002", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> living_alone_65_USA # #Disability # get_acs("county", table = "B18101", state="TX", year= 2023, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% .[,-8] %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> disability_USA # #Independent Living # get_acs("county", table = "B18107", state="TX", year= 2023, survey = "acs5", geometry = TRUE) %>% left_join(., acs_2023_vars, by = c("variable"="name")) %>% separate_wider_delim(cols="label", delim = "!!", names_sep = "", too_few = "align_start") -> USA_independentliving ## current state z-composite draft (2/15/24, 1:22pm) #USA Disability scores (1) disability_USA %>% #single out only the elderly (65+) filter(label4 == "65 to 74 years:" | label4 == "75 years and over:") %>% #remove all the "grand total" rows filter(!is.na(label5)) %>% #calculate the "grand total" that we need to use by summing the disabled + not disabled across men and women transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% #calculate the percentage of those that are disable and sum them up, and then divide by total elders to get the total proportion of disabled filter(label5 == "With a disability") %>% mutate(prop = 100 * (estimate/total_elders)) %>% ##this feels REALLY [adjective], but it's what they did, I swear to God transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Disabled") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% unique(.) %>% arrange(desc(-total_prop)) %>% st_as_sf(.) ->disability_USA_Z #USA Poverty scores (2) poverty_USA %>% filter(label5 == "65 to 74 years" | label5 == "75 years and over") %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(grepl("below", label3)) %>% mutate(prop = 100 * (estimate/total_elders)) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% arrange(desc(-total_prop)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Poverty") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) ->poverty_USA_Z #USA Living Alone scores (3) living_alone_65_USA %>% filter(variable == "B11007_003") %>% mutate(prop = 100 * (estimate/summary_est)) %>% mutate(age = "65+") %>% unique(.) %>% arrange(desc(-prop)) %>% mutate(total_prop = prop, rank = rank(prop, ties.method = "min"), measure = "Living Alone") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> living_alone_65_USA_Z #USA Not Married scores (4) maritalstatus_USA %>% filter(label5 == "65 to 74 years" | label5 == "75 to 84 years" | label5 == "85 years and over" | label6 == "65 to 74 years" | label6 == "75 to 84 years" | label6 == "85 years and over" | label7 == "65 to 74 years" | label7 == "75 to 84 years" | label7 == "85 years and over") %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(label4 == "Never married:") %>% transform(not_married_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(prop = 100 * (not_married_sum/total_elders)) %>% dplyr::select(NAME, not_married_sum, prop, geometry) %>% unique(.) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% unique(.) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Not Married") %>% arrange(desc(-total_prop)) %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> USA_not_married_Z #USA Widowed, Separated, or Divorced scores (5) maritalstatus_USA %>% filter(label5 == "65 to 74 years" | label5 == "75 to 84 years" | label5 == "85 years and over" | label6 == "65 to 74 years" | label6 == "75 to 84 years" | label6 == "85 years and over" | label7 == "65 to 74 years" | label7 == "75 to 84 years" | label7 == "85 years and over") %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(label4 == "Widowed:" | label4 == "Divorced:" | label6 == "Separated:") %>% transform(widow_separate_divorced_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% transform(div_sep_wid_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(prop = 100 * (div_sep_wid_sum/total_elders)) %>% dplyr::select(NAME, div_sep_wid_sum, prop, geometry) %>% unique(.) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% unique(.) %>% arrange(desc(-div_sep_wid_sum)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Widowed, Divorced, or Separated") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> USA_widow_separate_divorced_Z #USA Independent Living scores (6) USA_independentliving %>% filter(label4 == "65 to 74 years:" | label4 == "75 years and over:") %>% filter(!is.na(label5)) %>% transform(total_elders = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(age = "65+") %>% filter(label5 == "With an independent living difficulty") %>% transform(diff_indep_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% transform(diff_indep_sum = ave(.$estimate, .$NAME, FUN=sum)) %>% mutate(prop = 100 * (diff_indep_sum/total_elders)) %>% dplyr::select(NAME, diff_indep_sum, prop, geometry) %>% unique(.) %>% transform(total_prop = ave(.$prop, .$NAME, FUN=sum)) %>% unique(.) %>% arrange(desc(-diff_indep_sum)) %>% mutate(rank = rank(total_prop, ties.method = "min"), measure = "Difficulty Living Independently") %>% dplyr::select(NAME, measure, total_prop, rank, geometry) %>% st_as_sf(.) -> USA_independentliving_Z rbind(poverty_USA_Z, living_alone_65_USA_Z, USA_widow_separate_divorced_Z, USA_not_married_Z, USA_widow_separate_divorced_Z, disability_USA_Z, USA_independentliving_Z) %>% unique(.) %>% group_by(measure) %>% mutate(my_z_score = (total_prop - mean(total_prop))/sd(total_prop)) %>% ungroup(.) %>% transform(my_state_mean_z = ave(.$my_z_score, .$NAME, FUN=mean)) %>% mutate(my_possible_composite = my_state_mean_z %>% scales::rescale(., to=c(1,100)) %>% round(.), my_possible_rank = dense_rank(my_possible_composite)) %>% unique(.) %>% dplyr::select(NAME, my_possible_composite, my_possible_rank, my_state_mean_z) %>% unique(.) -> z_composites_county ########## note: use this code to build the map for States instead of counties ## ########## when computing for counties, remove the filter for Puerto Rico and DC # rbind(poverty_USA_Z, living_alone_65_USA_Z, USA_widow_separate_divorced_Z, USA_not_married_Z, USA_widow_separate_divorced_Z, disability_USA_Z, USA_independentliving_Z) %>% filter(NAME != "Puerto Rico" & NAME != "District of Columbia") %>% unique(.) %>% group_by(measure) %>% mutate(my_z_score = (total_prop - mean(total_prop))/sd(total_prop)) %>% ungroup(.) %>% dplyr::select(NAME, my_z_score, geometry) %>% unique(.) %>% transform(my_county_mean_z = ave(.$my_z_score, .$NAME, FUN=mean)) %>% dplyr::select(NAME, my_county_mean_z, geometry) %>% unique(.) %>% mutate(my_possible_composite = my_county_mean_z %>% scales::rescale(., to=c(1,100)) %>% round(.), my_possible_rank = dense_rank(my_possible_composite)) %>% unique(.) -> z_composites_state ## z_composites_state %>% dplyr::rename(., State = 1, `Composite Score` = 4, `State Rank` = 5) %>% tm_shape(.) + tm_polygons(col = "Composite Score", palette = blues9, breaks = c(1, 37, 48, 57, 70, 100), popup.vars = c("State", "Composite Score", "State Rank")) + tm_layout(title = "Risk of Social Isolation by State (5-Year Composite Score) (2023-2019)") ################ #z_composites_county %>% dplyr::rename(., County = 1, `Composite Score` = 2, `County Rank` = 3 ) %>% tm_shape(.) + tm_polygons(col = "Composite Score", palette = blues9, breaks = c(1,35, 40, 46, 52, 100), popup.vars = c("County", "Composite Score", "County Rank")) + tm_layout(title = "Risk of Social Isolation by County (5-Year Composite Score) (2023-2019)") + tm_credits("Aggregate Index using U.S. Census American Community Survey Values. Thanks to United Heath Foundation for original concept.") z_composites_county %>% dplyr::rename(., County = 1, `Composite Score` = 2, `County Rank` = 3 ) %>% tm_shape(.) + tm_polygons(col = "Composite Score", palette = blues9, breaks = c(1,34, 39, 45, 51, 100), popup.vars = c("County", "Composite Score", "County Rank"), as.count=TRUE) + tm_layout(title = "Risk of Social Isolation by County (5-Year Composite Score) (2022-2018)") + tm_credits("Aggregate Index using U.S. Census American Community Survey Values. Thanks to United Heath Foundation for original concept.")
Assignment 4
R lab 2
Validity & Reliability
homework1
homework1