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ArhatP42

Arhat Pradhan

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Analyzing Single Cell RNA Seq Data
This workflow focuses on analyzing RNA Seq data using Seurat. Includes cleaning up data, using different plots to visualize data, and then interpreting the data.
Loading and Reading Single Cell RNA Seq Data
Final Report File
Final RMD File
PCA on SNPs data from a vcf file Part 2 - Data Analysis
PCA on SNPs data from a vcf file Part 1 - Data Preparation
Portfolio: PCA Analysis Case Study - Bird Species Morphology
Working with VCF files 4: Imputation of missing data
Portfolio: Working with VCF files 3: Removing samples with many NAs
Portfolio: Working with VCF files 2: Removing invariant columns
Software Checkpoint: Loading your VCF file into R
Portfolio: Working with SNP files 1 - loading and transposing VCF files
Software Checkpoint - Setting a working directory and loading data
Software Checkpoint: vcfR
Portfolio Assignment
Vegan_PCA_with_msleep
Test