Dominance effect of 20 meat quality and composition traits in pigs

Check of distribution of visit length variable and analysis of residuals on model fitted

heritability meat traits

Model comparison WAIC and PSIS-LOO on distant replacements subset without influential observations with k_hat >1

bayesian estimating of variance components of visit length in distant replacements subset without observations influential

Check influential observations of visit length in subset of distant replacements, after find k_hats > 1 in LOO model comparison

Model comparison using Leave one out cross-validation

Convergence diagnostics and summary of deferents models fitted on visit length when the next visit was > 600 s

Convergence diagnostics and summary of deferents models fitted on visit length when the next visit was < 60 s

Check normality of weight gain, average feed intake, and feeder occupation time variables.

Model comparison with WAIC

Pearson, Spearman and Kendall Correlation coefficients between BLUPS of visit length at the feeder and other phenotypes in finishing pigs, using all data set (74415 records)

This code and document, make the genomic relationship matrices for each of MSU and Scotland pig populations with the 11.1 version of marker map, and after it build the big block diagonal matrix G join both populations

Analysis visit length and correlations with production traits from 7 trials

Model comparison visit length 600s

Bayesian estimating variance components on visit length at the feeder from 7 trials in pig production

Bayesian estimating variance components on visit length at the feeder from 7 trials in pig production

Analysis REML on visit length and correlations with productions traits

Models comparison trough Widely applicable information criterion (WAIC), using two data sets with the visit length at the feeder in pig production

Results bayesian estimating of variance components with Stan program, on 66.788 records of visit length time at the feeder from 6 trials

Results bayesian estimating of variance components (proportion of variance) with Stan program, on 6340 records of visit length time at the feeder when the next visit was greater than or equal to 600 sc.

Results bayesian estimating of variance components (proportion variance) with Stan program, on 50.652 records of visit length time at the feeder when the next visit was less than or equal to 60 sc.

Estimates heritability on meat traits, with G and A matrices

REML estimating variance components on visit length in trial 1

Summary bayesian estimating variance components on visit length in automatic’s feeder

Summary first visit of pigs to the automatic feeder in 6 trials