RPubs will retire in June 2027. Your existing documents will stay accessible through December 31, 2031
and Connect Cloud is the recommended home for new publishing. Read the blog post
gravatar

DeTwes

Dennis Twesmann

Recently Published

Robust ANOVA
Unique analysis steps of the workflow described in the document "Modeling the ThiI-tRNA Interaction" were allocated to individual sub-documents to give a concise overview. This document covers the sixth part: "Non Linear Least Squares Regression".
Analysis of Variance (ANOVA)
Unique analysis steps of the workflow described in the document "Modeling the ThiI-tRNA Interaction" were allocated to individual sub-documents to give a concise overview. This document covers the fifth part: "Analysis of Variance (ANOVA)".
Complete k-Fold Cross-validation
Unique analysis steps of the workflow described in the document "Modeling the ThiI-tRNA Interaction" were allocated to individual sub-documents to give a concise overview. This document covers the fourth part: "Complete k-Fold Cross-validation".
Kullback-Leibler Divergence Analysis
Unique analysis steps of the workflow described in the document "Modeling the ThiI-tRNA Interaction" were allocated to individual sub-documents to give a concise overview. This document covers the third part: "Kullback-Leibler Divergence Analysis".
Parameter Identifiability Analysis
Unique analysis steps of the workflow described in the document "Modeling the ThiI-tRNA Interaction" were allocated to individual sub-documents to give a concise overview. This document covers the second part: "Parameter Identifiability Analysis".
NLS-Regression
Unique analysis steps of the workflow described in the document "Modeling the ThiI-tRNA Interaction" were allocated to individual sub-documents to give a concise overview. This document covers the first part: "Non Linear Least Squares Regression".
Modeling the ThiI-tRNA Interaction
The following content provides an excerpt from a larger scientific work in the field of molecular structural biochemistry focusing on post-transcriptional transfer RNA modifications. It highlights the statistical modeling of the interaction between the 4-thiouridine synthetase ThiI and one of its target tRNA substrates in order to unravel the underlying stoichiometry of the complex that is formed. A comparative multi-model approach is presented aimed at finding the statistically best approximating binding model of this interaction in a set of alternative binding models all related to underlying 1:1 or 1:2 binding equilibria. The analytic workflow comprises ordinary non-linear least squares regression, model validation based on maximum likelihood profiling, model evaluation procedures such as Kullback-Leibler divergence analysis and cross validation, as well as generic and robust ANOVA approaches.