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CHRISTOPHER TERRANOVA

Recently Published

SKCM_ICGC_BRAF_vs_NRAS_RNA-seq_PCA
SKCM_ICGC_Primary_vs_Metastatic_RNA-seq_PCA
HDAC_DiffLoop_Differential_Looping
HDAC_DiffLoop_Distance_Plot
Unsupervised Dendrogram Analysis based on combinatorial chromatin states in Untreated and Resistant PRAD Patient Tumors
DiffBInd Analysis for Unsupervised Heatmap of H3K27ac in Control vs Menin (MI-503) Treated 22RV1 Cell Lines
DiffBInd Analysis for Unsupervised Heatmap of H3K4me1 in Control vs Menin (MI-503) Treated 22RV1 Cell Lines
DiffBind Analyis for Differential MA Plots from whole crypts in fed vs fasted mice
DiffBind Analysis for Unsupervised Heatmaps from whole crypts in fed vs fasted mice H3K9bhb
DiffBind Analysis for Unsupervised Heatmap from whole crypts in fed vs fasted mice H4K12bhb
DiffBind Analysis for Differential Heatmaps in Untreated vs Resistant PRAD Patient Tumors
DiffBind Analysis for Differential MA Plots in Untreated vs Resistant PRAD Patient Tumors
DiffBind Analysis for Unsupervised PCA plots in Untreated vs Resistant PRAD Patient Tumors
BoxPlot displaying RNA-seq expression levels from CCLE Cancer Samples and Roadmap Normal Samples
Unsupervised MDS analysis based on combinatorial chromatin states from whole crypts in fed vs fasted mice
Unsupervised heatmap analysis based on combinatorial chromatin states from whole crypts in fed vs fasted mice
Unsupervised MDS analysis based on combinatorial chromatin states in metastatic melanoma tumors
Heatmap displaying differential regions of combinatorial chromatin states in metastatic melanoma tumors
BoxPlot displaying RNA-seq expression levels from SKCM TCGA tumors (all metastatic samples) based on shortening or lengthening of broad H3K4me3 Domains (-/+2kb) in TCGA SKCM Tumors relative to melanocytes
Identification of bivalent losses in melanocytes transitioning to broad H3K4me3 domains in SKCM tumors and boxplot of TCGA SKCM RNA-seq expression levels (all metastatic samples) based on those domains
BoxPlot displaying RNA-seq expression levels from SKCM TCGA tumors (20 matching samples from chromatin state anaylsis), MSTC, CCLE cell lines and Normal ESCs, Germ Stem Cells, breast, brain, colon, lung, ovary and melanocyte samples from Roadmap
BoxPlot displaying RNA-seq expression levels from TCGA SKCM tumors (all metastatic samples) and melanocyte cell lines from Roadmap for a single gene
BoxPlot displaying RNA-seq expression levels from TCGA SKCM tumors (20 matching samples from chromatin state anaylsis) and melanocyte cell lines from Roadmap for a single gene
Single Gene BoxPlot using CCLE and Roadmap Data