The goal of this project is to scrape survey data from NCBI Biosample pages using rvest and summarize one common survey question across 8 samples.

This project demonstartes how to automate retrieval of mitochondrial CO1 gene sequences from NCBI for a chosen organism using R and the “ape” package.

NYC CitiBike data from 2016 was used to transform specific factors into lists.

Examples running through reading common files used in BIN

This document showed examples of datetime, charcater, numeric, boolean, array, vector, data frame, list, and tibble data structures in R using the “penguins” dataset.

Using Kaggle gene expression for yeast to explore data transformations in R.

In this project, I will analyze RNA-seq data from the brain of a 90-year-old woman in the RUSH Alzheimer’s study. The dataset includes information on gene length, FPKM (Fragments Per Kilobase of transcript per Million mapped reads), and TPM (Transcripts Per Million). I will create 3 exploratory plots that give biologically relevant insights into gene expression in this tissue.

Plot MS Spectra