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emptyhb

Bin He

Recently Published

OSR gene induction under phosphate starvation
Determine the level of induction for genes involved in oxidative stress response in _S. cerevisiae_ under phosphate starvation, in both _S. cerevisiae_ and _C. glabrata_.
2022-04-01 Pho4 chimera flow analysis QC
quality control and example plots for the data generated in the new host background, collected by Emily O'Brien in 2022.03
20210930-learn-to-analyze-flow-data-with-flowCore
use Lindsey and Jia's 20210402 autosampler data to learn how to analyze (gate and export) flow data using R, with the flowCore, flowClust, flowStats, flowWorkspace and openCyto packages.
2021-03-19 reanalyze Jia and Lindsey's flow cytometry data from 20210310
Jia and Lindsey have transformed a subset of the Pho4 chimera into two backgrounds, both containing the PHO5pr-mCherry reporter, but one in the exogenous ura3 locus with the endogenous PHO5 gene intact, and the other in the endogenous locus replacing the PHO5 CDS
20201215 Pho4-GFP integration with PHO5pr-mCherry test
Testing three methods of integrating Pho4-GFP constructs into yeast and testing their functionality with the PHO5 reporter
BLAST search to identify homologs for XP_028889033
Use blast against different databases to identify and curate putative homologs for the _C. auris_ gene XP_028889033
Learning how to cluster gene expression data
partly based on an excellent blog post here: http://www.opiniomics.org/you-probably-dont-understand-heatmaps/