ewilkinson_KRISP
Eduan
Recently Published
Germline Short Variant pipeline
Pipeline for calling short gremline variants.
Bulk RNA-Seq
Pipeline with HISAT2
TB pipeline
Pipeline for analyses of TB NGS data, assembly of reads, indexing of BAM files, variant calling from reference, hard filtering of variants (VCFs), masking of variants and collapsing variants into a single VCF file for NextStain build.