## Recently Published

##### Module 12 lab part 2

Module 12 lab part 2 from the "Summer R 2015" course from http://www.aejaffe.com/summerR_2015/labs

##### Illusion document

Key for module 12 part 1 from "Summer R 2015" course at http://www.aejaffe.com/summerR_2015/

##### Quantiles from Rle's with long lengths

Exploring how to calculate quantiles from the combined elements of a list made up of very long Rle's

##### Introduction to ggbio

Introduction to the ggbio Bioconductor package for 2013-10-08 "Genomics for students" meeting

##### Exploring HTS files

Genomics for students 2013-09-24 session

##### Outliers: fixed

Fixed version of the outliers Rmd using rCharts and knitrBootstrap

##### Remove outliers

Identify outliers in a data.frame using the sd as the cutoff. Mark the outlier observations as NA and keep a record of which were marked as NAs.

##### List plot

Make density plots from two lists of vectors, one for up and other for down regions.

##### Merging ranges accross samples

Merging ranges

##### derfinder2

Quick demo of the state of the art of derfinder2 using the new RStudio presentation tools

##### Longest string of ones

A solution for finding the longest string of ones in a vector.

##### userR2013 data analysis contest: data exploration

useR2013 data analysis competition. Quickly exploring the data.

##### Scrapping Ravens data from ESPN

Exercise for #jhsph753 on scrapping data from ESPN on the Ravens 2012 season

##### Number of ORFs by sliding window example

An example on how to plot the number of ORFs by sliding window along the genome axis.

##### Introduction to R and Biostatistics

For the 2012 LCG students

##### Testing

First test