Module 12 lab part 2 from the "Summer R 2015" course from http://www.aejaffe.com/summerR_2015/labs
Key for module 12 part 1 from "Summer R 2015" course at http://www.aejaffe.com/summerR_2015/
Exploring how to calculate quantiles from the combined elements of a list made up of very long Rle's
Introduction to the ggbio Bioconductor package for 2013-10-08 "Genomics for students" meeting
Genomics for students 2013-09-24 session
Fixed version of the outliers Rmd using rCharts and knitrBootstrap
Identify outliers in a data.frame using the sd as the cutoff. Mark the outlier observations as NA and keep a record of which were marked as NAs.
Make density plots from two lists of vectors, one for up and other for down regions.
Quick demo of the state of the art of derfinder2 using the new RStudio presentation tools
A solution for finding the longest string of ones in a vector.
useR2013 data analysis competition. Quickly exploring the data.
Exercise for #jhsph753 on scrapping data from ESPN on the Ravens 2012 season
An example on how to plot the number of ORFs by sliding window along the genome axis.
For the 2012 LCG students