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Searching for 7-base Motifs
Given a set of somatic mutations, counts the 7-base motifs in the flanking sequence around the mutation location and assign the most frequent one to each mutation
SNV/Indel Calling at RPCI
SNV/Indel calling pipeline using the RcwlPipelines library.
Lollipop Plot with trackViewer
An example drawing a lollipop plot using trackViewer in R.