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qshenfeng

Shenfeng Qiu

Recently Published

ssbm_4_samples_integrated
Integrated four bone marrow samples
ssbm sample RNA velocity
human bone marrow treated with erythropoeitin for directed differentiation. Cell type annotation not completed yet.
Anndata file manipulation
download anndata file from Tabula Sapiens, apply filtering, subsetting etc.
Simple Volcano plot for seurat .csv file
select a certain cluster and do volcano plot
human bone marrow sample
human bone marrow sample E15 no E treatment
ss_one_bone_marrow_E15
one human bone marrow sample
bulk RNAseq analysis - mouse brain tissue
bulk RNAseq analysis - mouse brain tissue
Another DESeq2 tutorial from counting matrix
Another DESeq2 tutorial from counting matrix
DESeq bulk analysis online tutorial
DESeq bulk analysis online tutorial
bulk RNAseq analysis
bulk RNAseq analysis from gene counts table. Gene counts table generated using STAR under linux server
Signac_PMBC_10K
This is re-run the Signac vignette - human PBMC10K
MET_TG2
This is the second experiment comparing Met transgene controllable expression.
DRG_cells_subset
Selected clusters for further analysis of DRG cells
DRG neurons two sample
scRNAseq for DRG neurons from control and treated groups
Qiu lab - UA COM-PHX
Qiu lab work
Qiu lab - UA COM-PHX
Lab projects and techniques
Qiu lab - UA COM-PHX
Lab projects and techniques
Sample scRNAseq analysis
By LC, for QIU lab
glimmaMA plot output Document
test publishing on RPubs
Test publishing document
From an online dataset