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rglab

cytoverse

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GatingSet to treeclimbR
This example demonstrates the ability to easily convert a GatingSet to a TreeSummarizedExperiment, which is then further used for visualization and differential analysis using treeclimbR.
on-disk-idx-gscluster
on-disk-idx-big-gs
on-disk-idx
gs_clusterApply
cyto_stats
cytoframe -- rownames
get subtree from gs
gs-singleCellExperiment
cytoqc + flowjo_to_gatingset
use cytoqc to preprocess fcs for flowjo_to_gatingset
negative control based gating
openCyto register customized gating method through plugin apply the gates based on the negative control samples within each group
cytoqc for lyoplate project --DC
cytoqc lyoplate project DC panel from different labs
cytoqc for lyoplate project --tcell
cytoqc lyoplate project tcell panel from different labs
cytobank experiment to gatingset
CytoML cytobank_to_gatingset CytobankExperiment support