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zee2110

Zander Everton

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test ggpubr/ggplot2
Testing Google Sheets Access
Pairwise alignment of Homo sapien and Pan troglodytes IFNL4 protein sequences
This worksheet goes through the steps necessary to create a pairwise sequence alignment using accession numbers from different databases. It also shows how to recreate scoring matrix stipulations for the alignments.
Pie graphs part 1
This file shows how to create and adjust pie graphs in R.
Adjusting dotplot setting in R to investigate sequence repeats in Shroom
This document shows how to create dot-plots with unnecessary information omitted.
Using dotplots in R to investigate sequence repeats
This file shows how to create dotplots and use them to look for repeats within sequences.
Using R to investigate gene IFNL4 for sequence repeats
This document shows how the use of dotplots can be applied to search for repeats in the gene IFNL4
Intro to Dot-plots
This file shows how to set two sequences against each other to form a dot-plot and assess the relation between the sequences.
Saving FASTA file walkthrough (IFNL4)
This directory shows how to obtain and save FASTA files
Working Directory
This is a document with a step-by-step process of relocating the working directory to which files are saved.
Bioinformatic Workflow (Computation Biology: Fall 2021)
Creates multiple sequence alignment (msa) for the Shroom protein across 14 species.
Document
Example Markdown publication