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jflowers

julian flowers

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waiting lists
Methods
discuss
Draft TF alpha diversity
Flow charts
Model insects
Bird model
GAM results
Mammal GAM for predictors of species richness TFs
Literature review
POMS
futuRe possibilities
Slide set for Tuesday sessions
updated refs
Tiny Forest
Using tinyForestR (1)
Using tinyForestR
tiny-forest
tinyForestR
Lamarre et al
nbn_atlas api
rapid run through of extracting nbn atlas data via the API in R
Critical appraisal
Image table
dynamic-world-in-r
Penguin model studio
geemap
Govt responded petitions
Dynamic world maps in python
Grouse shooting
Grouse shooting
R lessons
tortoise
Desert tortoises
Using behaviour ecology to deter predation of Agassiz's desert tortoise by ravens in the Mojave desert
Eco-glossary V2
Eco-glossary V1
Eco-glossary V1
Eco-glossary
coord-table
srUtils
taxa
e360
Getting coordinates from pdfs
Herbivory studies: map
River Granta
jupyter-test
Rewilding
One years worth of Guardian articles about rewilding
E011
ladder plot common birds
Common bird density
bird trends
JNCC designations
Abstract This collection of files details the conservation designations of over 13,000 UK "taxa" that have been assigned some form of rarity, threat or legal status in Great Britain or the UK. It is a collation of many different "designation" lists including country-specific lists, and lists produced by national and International conventions or directives. The collection of files contains an Excel workbook, a guidance document detailing how to use the spreadsheet, and a document detailing the constituents lists included in the spreadsheet. These resources are available to download either separately or as a zipped file. The following designation types are included in the spreadsheet: Bern Convention (Appendices 1, 2 and 3); Bonn Convention – Convention on the Conservation of Migratory Species (Appendices 1 and 2, AEWA, ASCOBANS, EUROBATS); Biodiversity Action Plan (BAP) UK priority species list; Birds Directive (Annexes 1, 2.1 and 2.2); Birds of Conservation Concern (Red/Amber list and not based on IUCN criteria); Convention on Migratory Species; EC CITES (Annexes A, B, C and D); Global Red list status (this includes red listings based on pre-1994, 1994 and 2001 IUCN guidelines); Habitats Directive (Annexes 2, 4 and 5); Nationally Rare/Scarce (not based on IUCN criteria); Nationally Scarce and Nationally Rare Species (also with an IUCN status); National Red Lists (this includes red listings based on pre-1994, 1994 and 2001 IUCN guidelines); OSPAR; Protection of Badgers Act 1992; Species of principal importance in England, Scotland, Wales and North Ireland (NERC section 41 and 42 lists, Scottish Biodiversity List and Northern Ireland Priority Species List); The Conservation (Nature Habitats) Regulations (NI) 1995 (Schedule 2, 3 and 4); The Conservation of Habitats and Species Regulations 2010 (Schedule 2, 4 and 5); The Wildlife and Countryside Act 1981 (Schedule 1, 5 and 8); Wildlife (NI) Order 1985 (Schedule 1 part 1, Schedule 1 part 2, Schedule 5, Schedule 8 part 1, Schedule 8 part 2).
scrolly1
scrolly
Deforestation
what works in conservation
Protected species
E011 website
Conservation evidence
Adapted from https://conservationevidence.com/
plastic pollution
Greenwashing articles II
Greenwashing articles
NEQOS-1
Microplastic pollution
microplastics
Covid test positvity
test-site
govdown test
xaringan
positivity
Willow tit kdes
Week 12 practical
Willow tit report
little-egret-sdm
Impact of climate change on little egret range in Britain
Willow tit models 1
Willow tit models
Updated reading list
Reading list for ARU Applied Animal Conservation MSc
Document
ARU course reading list
text-mining
Test AS coverage
AS case rates
Plot
Peaks
MSOA maps
Case DSRs
Document
Public covid data
covid public data
nlp
personal tweets 2
tweets
Data science and public health
Rapid review of Pubmed Central
Rapid literature review - use of CPRD and the THIN
UK studies based on UK primary EHR data bases (THIN and CPRD)
Modelled mortality + animation
Blockchain in health prt 2
Glossary update
Rapid literature review - deep learning and public health
Outlines a method for searching, extracting and analysing research abstracts for given search term using a parameterised R markdown document
gdelt
Document
MM clusters
haq-figures
JSNA analysis
Scraping and analysing JSNAs
PHE-ds
Slides for UCL/CPD
AI in litere
Health intelligence webstats
Web-scraping 2
Web-scraping vignette
Precision public health
big data def
NHS-R talk
Keywords 20 topics ai_ml public health
Topic modelling of 38000 abstracts for AI/ML and public health
topic mentions
dph report topics
Scraping DPH reports from the web
Outlines a workflow for discovering, extracting and analysing Director of Public Health reports
Notes on falls
Work in progress. Deaths from falls in older people are increasing. This compares GBD estimates with ONS counts. Looks like a coding or step change in ONS around 2012. GBD gives higher estimates because it recodes deaths - smoother curve and higher estimates. Have embedded the GBD viz for falls deaths so can see the GBD model
Draft API paper
DS PH glossary
Profiles vs reds
Extracting pdf tables
PHE pubs and blogs
test commentary
phe blogs
Fingertips metadata
Interactive data table of fingertips metadata
Shinysense health data quiz
fingertipsR cheatsheet
Summary prevalence
Fingertips structure
Fingertips audit
Govstyle and Rmd fingertips
Markdown and fingertipsR
SII
GP catchments
highcharts/ sparklines
Fingertips Google Analytics
mapping
10 min map
HTMLmap
Hans Rosling
api2
K-means 3
Updated k-means analysis of GP dataset
friday_messages
Fingertips API: tutorial
Monthly bulletins
DALY comparison
Calendar heatmap of daily deaths
Calendar heat maps can show daily values of a variable in a calendar format i.e. by year by month by week by day.
Pubmed searching
Prevalence
PH_data_science
Draft prevalence report
Fingertips API: draft
friday_messages
KI stats v2
webstats1
ggplotly1
HPclust
GP clustering update part 2
Time series mortality
GP clustering update
webstats
profilehmap2
profilehmap1
profilehmap
rChart example
using analytics
Diagnosis
k means 2
PML assignment
PML assignment
k-means version 2
Shiny app
Attempt for data products course
Benchmarking pilot
dygraph test
Experimental - SII
Code for calculating slope indices of inequality
SIIs for CCGs - experimental
Experimental plot of slope indices for CCGs based on GP practice profile data
Birth projections (weekly)
Birth wt forecast
test