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marschmi

Marian L. Schmidt

Recently Published

Intro to tidyR & dplyR
Slides from a presentation that I gave on Thursday, May 11th, 2017 at the Ann Arbor R Meetup group monthly meeting.
Intro to Git & RMarkdown
Dynamic Documents with RMarkdown and Knitr
Want to learn how to create dynamic documents with RMarkdown and Knitr? If so, this tutorial was created for you!
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Introductory Version Control with Git
Lesson plan for the git lesson at a University of Michigan Women in Science and Engineering Software carpentry workshop on January 5th, 2016 (http://umswc.github.io/2016-01-04-wise-umich/)
Phylogenetic conservation of freshwater lake habitat preference varies between abundant bacterioplankton phyla
The rendered code file to produce all the figures and statistical analyses for "Phylogenetic conservation of freshwater lake habitat preference varies between abundant bacterioplankton phyla" published in Environmental Microbiology on Nov. 19th, 2015 by M.L. Schmidt, J.D. White, and V.J. Denef.
SWC R Workshop - October 19th, 2015
First half day of "Introduction to R"
Reproducible Research Using RMarkdown
This tutorial walks its learners through how to make their bioinformatics workflow more reproducible. It includes a discussion of reproducibility, a hands-on module using version control through RStudio and finally introduces RMarkdown.
Reproducible Research Using RMarkdown
This tutorial goes over how to make your scientific computing workflow more reproducible. This tutorial was made for Titus Brown's Next Generation Sequencing Data Analysis Workshop - Week 3.